PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_2BS_8D66D6B82.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bZIP
Protein Properties Length: 336aa    MW: 37457.4 Da    PI: 9.5478
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_2BS_8D66D6B82.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_129.41.7e-095190544
                           CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNka 44
                           k  rr+++NReAAr+sR+RKk ++++Le    +L +  ++
  Traes_2BS_8D66D6B82.1 51 KTLRRLAQNREAARKSRLRKKSYVQQLESSKLKLAQLEQE 90
                           7889************************855444444444 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.7E-647110IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.3354993IPR004827Basic-leucine zipper domain
SuperFamilySSF579599.85E-75194No hitNo description
PfamPF001701.8E-65192IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.3E-75296No hitNo description
PROSITE patternPS0003605469IPR004827Basic-leucine zipper domain
PfamPF141441.1E-33133208IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    Send to blast
MADASSRTDN STVVDNDGKI YRLEQGQSGG AIMASNSSDR SDRSDKPLDQ KTLRRLAQNR  60
EAARKSRLRK KSYVQQLESS KLKLAQLEQE LQKARQQGIF ISSSGDQTHA MSGNGAMTFD  120
LEYTRWLEDQ NKQINELRTA VNAHASDSDL RLIVDGIMAH YDEIFKVKGV AAKADVFHIL  180
SGMWKTPAER CFLWLGGFRP SELLKLLVNH LEPLTEQQML GLTNLQQSSQ QAEDALSQGM  240
EALQQSLAET LAGSLGSSAG SSGNVANYMG QMAMAMGKLG TLENFLRQAD NLRQQTLHQM  300
QRILTIRQAS RALLAIHDYF SRLRALSSLW LARPRE
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankJX4243160.0JX424316.1 Triticum monococcum TGA-type basic leucine zipper protein mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008651318.10.0PREDICTED: uncharacterized protein LOC100279481 isoform X3
RefseqXP_008651319.10.0PREDICTED: uncharacterized protein LOC100279481 isoform X3
RefseqXP_008651320.10.0PREDICTED: uncharacterized protein LOC100279481 isoform X3
SwissprotQ415580.0HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLW5BLX70.0W5BLX7_WHEAT; Uncharacterized protein
STRINGMLOC_13431.20.0(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP48638185
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.21e-139TGACG motif-binding factor 6
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]